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EvolutionLab
TwisstN'Tern
A method for analyzing topology weights in a ternary framework
TwisstNTern is a user-friendly Python program for visualising and analysing topology weights in a ternary plot. We first used it here in the analysis of Littorina whole-genome sequences.
https://github.com/seanstankowski/TwisstNTern
Software
SnapPalette
A program for analysing the colour of snapdragon flowers
SnapPalette is a python script designed for the analysis of color variations in snapdragon flowers (Antirrhinum). It quantifies different color metrics and saves the results in a CSV format. It woulduseful for analysing the colour of other organisms.
https://github.com/seanstankowski/SnapPallete
A standard pipeline for processing short-read sequencing data from Littorina snails V.1
This protocol outlines a default pipeline recommend for analysing short-read data for Littorina marine snails. The pipeline was designed based on our experience processing WGS data, and careful consideration of the available tools.
https://www.protocols.io/view/a-standard-pipeline-for-processing-short-read-sequ-dm6gp3m21vzp/v1
Protocols
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